miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166069370|gb|FD518861.1|FD518861 CAGGCATGCATCACATTCCAAACTTGTTCCTCAGGAACATGAATCTCACAACAACAATAAAGACACAGATAGAGGAGATA
TCTCTGCAACAGAAGTAATGCATTCCACCAAATCCATTACATGTCATATATACTACGAGACGGGCAATACGAGATTGGAA
TGCGCAAGGTATCGGAGGCTGCTGAGCACGCATAACATAGCCAGTTCCGAGCACGACCCTTATTACAACATTATTGAAGC
TTCAGGTGTACCGATGCGTCGAGTTGATCCAGCATAAAGATTTAAGAACTCGCGAGCAACTTCTTGATGTCCTTCTCGAT
GCTGAGGGGGGAGGTGGTCGGCGCGTAGCGATCCACAACATTCCCATCCTTGTCAACCAAGAACTTGGAGAAGTTCCATT
TGATGTTGTCCCCGAAGAGACTGCCTTTGCTTGACTTCAGAAACTTGTAGACAGGTGCAACATTGTCACCATTGACATCA
ACCTTGTCAAAAATTGGATACTCGGCCTTGAAGCGAGTGCAAGCAAACTGAACAATTTCCTCATTAGTGCCAGGTTCCTG
CCCACCAAACTGGTTGCATGGGAAAGCAAGGATCTCAAAACCTGTTGGTCAAATCAAATTGTTAGCATAATACTTCCTCC
GTTCCTAAATATAAGTCTTTTAAGCGATTTCACTATATGTCTACATACGGAGCAAAATG




Most similar to sp|O48646|GPX6_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O48646|GPX6_ARATH Probable phospholipid hydroperoxide
           glutathione peroxidase 6, mitochondrial OS=Arabidopsis
           thaliana GN=GPX6 PE=2 SV=2
          Length = 232

 Score =  202 bits (514), Expect = 2e-51
 Identities = 95/103 (92%), Positives = 98/103 (95%)
 Frame = -2

Query: 602 GFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDNVAPVYKFLKSSKG 423
           GFEILAFPCNQFG QEPGTNEEIVQFACTRFKAEYPIFDKVDVNGD  APVYKFLKSSKG
Sbjct: 126 GFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLKSSKG 185

Query: 422 SLFGDNIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEKDIKKLL 294
            LFGD IKWNF+KFLVDKDGNVVDR+APTTSPLSIEKD+KKLL
Sbjct: 186 GLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLL 228